在多进程中,共享只读数据是否会被复制到不同的进程中?

70

我拥有的代码看起来有点像这样:

glbl_array = # a 3 Gb array

def my_func( args, def_param = glbl_array):
    #do stuff on args and def_param

if __name__ == '__main__':
  pool = Pool(processes=4)
  pool.map(my_func, range(1000))
有没有办法确保(或鼓励)不同的进程不会获得glbl_array的副本,而是共享它。如果无法停止复制,我将使用memmapped数组,但我的访问模式不是很规则,因此我预计memmapped数组会更慢。以上看起来像尝试的第一件事。这是在Linux上。我只想从Stackoverflow获得建议,而不想惹恼系统管理员。你认为如果第二个参数是一个真正的不可变对象,比如glbl_array.tostring(),这样做会有帮助吗?

我认为不同的进程不能共享内存变量。 - Andrey Sboev
12
那你今天学到了些什么 :) - Sven Marnach
5个回答

132

你可以很容易地使用multiprocessing中的共享内存功能与NumPy一起使用:

import multiprocessing
import ctypes
import numpy as np

shared_array_base = multiprocessing.Array(ctypes.c_double, 10*10)
shared_array = np.ctypeslib.as_array(shared_array_base.get_obj())
shared_array = shared_array.reshape(10, 10)

#-- edited 2015-05-01: the assert check below checks the wrong thing
#   with recent versions of Numpy/multiprocessing. That no copy is made
#   is indicated by the fact that the program prints the output shown below.
## No copy was made
##assert shared_array.base.base is shared_array_base.get_obj()

# Parallel processing
def my_func(i, def_param=shared_array):
    shared_array[i,:] = i

if __name__ == '__main__':
    pool = multiprocessing.Pool(processes=4)
    pool.map(my_func, range(10))

    print shared_array

该代码打印

[[ 0.  0.  0.  0.  0.  0.  0.  0.  0.  0.]
 [ 1.  1.  1.  1.  1.  1.  1.  1.  1.  1.]
 [ 2.  2.  2.  2.  2.  2.  2.  2.  2.  2.]
 [ 3.  3.  3.  3.  3.  3.  3.  3.  3.  3.]
 [ 4.  4.  4.  4.  4.  4.  4.  4.  4.  4.]
 [ 5.  5.  5.  5.  5.  5.  5.  5.  5.  5.]
 [ 6.  6.  6.  6.  6.  6.  6.  6.  6.  6.]
 [ 7.  7.  7.  7.  7.  7.  7.  7.  7.  7.]
 [ 8.  8.  8.  8.  8.  8.  8.  8.  8.  8.]
 [ 9.  9.  9.  9.  9.  9.  9.  9.  9.  9.]]

然而,Linux在fork()中具有写时复制语义,因此即使不使用multiprocessing.Array,只要不写入数据,则数据将不会被复制。


13
请注意,对于Python中的fork()函数,实际上是指访问时进行复制(因为仅访问该对象就会改变其引用计数)。 - Fabio Zadrozny
14
复制操作只会复制包含引用计数整数的内存页,因此 Numpy 数组中的数据不会被复制。 - pv.
6
明白了。您应该使用 np.frombuffer(shared_array_base.get_obj()) 替换 np.ctypeslib.as_array。 - Moj
1
我猜在Windows上这个方法行不通,因为没有fork()函数可以让父进程的变量对子进程可见。如果是这样的话,在该操作系统上如何将共享数组传递给池工作进程呢? - Brian White
1
жҲ‘дёҚзҹҘйҒ“иҝҷжҳҜеҗҰжҳҜз”ұдәҺmultiprocessingзҡ„жңҖиҝ‘жӣҙж”№пјҢдҪҶжҲ‘еңЁLinuxдёҠдҪҝз”ЁPython 2.7 / 3.4жөӢиҜ•дәҶжӯӨд»Јз ҒпјҢ并и§ҰеҸ‘дәҶassertгҖӮ - BenC
显示剩余8条评论

14

以下代码在Win7和Mac上运行正常(可能在Linux上也可以,但未经测试)。

import multiprocessing
import ctypes
import numpy as np

#-- edited 2015-05-01: the assert check below checks the wrong thing
#   with recent versions of Numpy/multiprocessing. That no copy is made
#   is indicated by the fact that the program prints the output shown below.
## No copy was made
##assert shared_array.base.base is shared_array_base.get_obj()

shared_array = None

def init(shared_array_base):
    global shared_array
    shared_array = np.ctypeslib.as_array(shared_array_base.get_obj())
    shared_array = shared_array.reshape(10, 10)

# Parallel processing
def my_func(i):
    shared_array[i, :] = i

if __name__ == '__main__':
    shared_array_base = multiprocessing.Array(ctypes.c_double, 10*10)

    pool = multiprocessing.Pool(processes=4, initializer=init, initargs=(shared_array_base,))
    pool.map(my_func, range(10))

    shared_array = np.ctypeslib.as_array(shared_array_base.get_obj())
    shared_array = shared_array.reshape(10, 10)
    print shared_array

9

对于那些被困在使用Windows操作系统的人来说,由于Windows不支持fork()(除非使用CygWin),pv的答案不起作用。全局变量无法共享到子进程中。

相反,您必须在Pool/Process的初始化器中传递共享内存,如下所示:

#! /usr/bin/python

import time

from multiprocessing import Process, Queue, Array

def f(q,a):
    m = q.get()
    print m
    print a[0], a[1], a[2]
    m = q.get()
    print m
    print a[0], a[1], a[2]

if __name__ == '__main__':
    a = Array('B', (1, 2, 3), lock=False)
    q = Queue()
    p = Process(target=f, args=(q,a))
    p.start()
    q.put([1, 2, 3])
    time.sleep(1)
    a[0:3] = (4, 5, 6)
    q.put([4, 5, 6])
    p.join()

(这不是numpy,也不是好的代码,但它说明了重点 ;-)


1

我知道,我正在回答一个非常古老的问题。但是这个主题在Windows操作系统中不起作用。上面的答案没有提供实质性的证据,是误导性的。所以我尝试了以下代码。

# -*- coding: utf-8 -*-
from __future__ import annotations
import ctypes
import itertools
import multiprocessing
import os
import time
from concurrent.futures import ProcessPoolExecutor
import numpy as np
import numpy.typing as npt


shared_np_array_for_subprocess: npt.NDArray[np.double]


def init_processing(shared_raw_array_obj: ctypes.Array[ctypes.c_double]):
    global shared_np_array_for_subprocess
    #shared_np_array_for_subprocess = np.frombuffer(shared_raw_array_obj, dtype=np.double)
    shared_np_array_for_subprocess = np.ctypeslib.as_array(shared_raw_array_obj)


def do_processing(i: int) -> int:
    print("\n--------------->>>>>>")
    print(f"[P{i}] input is {i} in process id {os.getpid()}")
    print(f"[P{i}] 0th element via np access: ", shared_np_array_for_subprocess[0])
    print(f"[P{i}] 1st element via np access: ", shared_np_array_for_subprocess[1])
    print(f"[P{i}] NP array's base memory is: ", shared_np_array_for_subprocess.base)
    np_array_addr, _ = shared_np_array_for_subprocess.__array_interface__["data"]
    print(f"[P{i}] NP array obj pointing memory address is: ", hex(np_array_addr))
    print("\n--------------->>>>>>")
    time.sleep(3.0)
    return i


if __name__ == "__main__":
    shared_raw_array_obj: ctypes.Array[ctypes.c_double] = multiprocessing.RawArray(ctypes.c_double, 128)  # 8B * 1MB = 8MB
    # This array is malloced, 0 filled.
    print("Shared Allocated Raw array: ", shared_raw_array_obj)
    shared_raw_array_ptr = ctypes.addressof(shared_raw_array_obj)
    print("Shared Raw Array memory address: ", hex(shared_raw_array_ptr))

    # Assign data
    print("Assign 0, 1 element data in Shared Raw array.")
    shared_raw_array_obj[0] = 10.2346
    shared_raw_array_obj[1] = 11.9876

    print("0th element via ptr access: ", (ctypes.c_double).from_address(shared_raw_array_ptr).value)
    print("1st element via ptr access: ", (ctypes.c_double).from_address(shared_raw_array_ptr + ctypes.sizeof(ctypes.c_double)).value)

    print("Create NP array from the Shared Raw array memory")
    shared_np_array: npt.NDArray[np.double] = np.frombuffer(shared_raw_array_obj, dtype=np.double)

    print("0th element via np access: ", shared_np_array[0])
    print("1st element via np access: ", shared_np_array[1])

    print("NP array's base memory is: ", shared_np_array.base)
    np_array_addr, _ = shared_np_array.__array_interface__["data"]
    print("NP array obj pointing memory address is: ", hex(np_array_addr))

    print("NP array , Raw array points to same memory , No copies? : ", np_array_addr == shared_raw_array_ptr)

    print("Now that we have native memory based NP array , Send for multi processing.")

    # results = []
    with ProcessPoolExecutor(max_workers=4, initializer=init_processing, initargs=(shared_raw_array_obj,)) as process_executor:
        results = process_executor.map(do_processing, range(0, 2))

    print("All jobs sumitted.")
    for result in results:
        print(result)

    print("Main process is going to shutdown.")
    exit(0)

这是样例输出

Shared Allocated Raw array:  <multiprocessing.sharedctypes.c_double_Array_128 object at 0x000001B8042A9E40>
Shared Raw Array memory address:  0x1b804300000
Assign 0, 1 element data in Shared Raw array.
0th element via ptr access:  10.2346
1st element via ptr access:  11.9876
Create NP array from the Shared Raw array memory
0th element via np access:  10.2346
1st element via np access:  11.9876
NP array's base memory is:  <multiprocessing.sharedctypes.c_double_Array_128 object at 0x000001B8042A9E40>
NP array obj pointing memory address is:  0x1b804300000
NP array , Raw array points to same memory , No copies? :  True
Now that we have native memory based NP array , Send for multi processing.

--------------->>>>>>
[P0] input is 0 in process id 21852
[P0] 0th element via np access:  10.2346
[P0] 1st element via np access:  11.9876
[P0] NP array's base memory is:  <memory at 0x0000021C7ACAFF40>
[P0] NP array obj pointing memory address is:  0x21c7ad60000

--------------->>>>>>

--------------->>>>>>
[P1] input is 1 in process id 11232
[P1] 0th element via np access:  10.2346
[P1] 1st element via np access:  11.9876
[P1] NP array's base memory is:  <memory at 0x0000022C7FF3FF40>
[P1] NP array obj pointing memory address is:  0x22c7fff0000

--------------->>>>>>
All jobs sumitted.
0
1
Main process is going to shutdown.

上述输出来自以下环境:
OS: Windows 10 20H2
Python: Python 3.9.9 (tags/v3.9.9:ccb0e6a, Nov 15 2021, 18:08:50) [MSC v.1929 64 bit (AMD64)]

你可以清楚地看到,每个子进程的numpy指向的内存数组是不同的,这意味着进行了内存拷贝。因此,在Windows操作系统中,子进程不共享底层内存。我认为这是由于操作系统的保护机制,进程不能引用内存中的任意指针地址,否则会导致内存访问违规。

1
如果您正在寻找一种在 Windows 上有效地工作,并且适用于不规则访问模式、分支以及其他需要基于共享内存矩阵和进程本地数据的组合分析不同矩阵的情况,那么 ParallelRegression 包中的 mathDict 工具包就是为处理这种情况而设计的。请注意,该内容已保留 HTML 标签。

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