在Spark ML / pyspark中以编程方式创建特征向量

24
我想知道在pyspark中是否有一种简洁的方法,可以对具有多个数值列特征的DataFrame运行机器学习(例如KMeans)。

也就是说,如同在Iris数据集中所示:

(a1=5.1, a2=3.5, a3=1.4, a4=0.2, id=u'id_1', label=u'Iris-setosa', binomial_label=1)

我希望使用KMeans算法,而不需要手动添加特征向量作为新列并在代码中反复硬编码原始列来重新创建数据集。

我想要改进的解决方案:

from pyspark.mllib.linalg import Vectors
from pyspark.sql.types import Row
from pyspark.ml.clustering import KMeans, KMeansModel

iris = sqlContext.read.parquet("/opt/data/iris.parquet")
iris.first()
# Row(a1=5.1, a2=3.5, a3=1.4, a4=0.2, id=u'id_1', label=u'Iris-setosa', binomial_label=1)

df = iris.map(lambda r: Row(
                    id = r.id,
                    a1 = r.a1,
                    a2 = r.a2,
                    a3 = r.a3,
                    a4 = r.a4,
                    label = r.label,
                    binomial_label=r.binomial_label,
                    features = Vectors.dense(r.a1, r.a2, r.a3, r.a4))
                    ).toDF()


kmeans_estimator = KMeans()\
    .setFeaturesCol("features")\
    .setPredictionCol("prediction")\
kmeans_transformer = kmeans_estimator.fit(df)

predicted_df = kmeans_transformer.transform(df).drop("features")
predicted_df.first()
# Row(a1=5.1, a2=3.5, a3=1.4, a4=0.2, binomial_label=1, id=u'id_1', label=u'Iris-setosa', prediction=1)

我正在寻找一个解决方案,类似于:

feature_cols = ["a1", "a2", "a3", "a4"]
prediction_col_name = "prediction"
<dataframe independent code for KMeans>
<New dataframe is created, extended with the `prediction` column.>
1个回答

39

您可以使用VectorAssembler工具:

from pyspark.ml.feature import VectorAssembler

ignore = ['id', 'label', 'binomial_label']
assembler = VectorAssembler(
    inputCols=[x for x in df.columns if x not in ignore],
    outputCol='features')

assembler.transform(df)

它可以与k-means结合使用ML Pipeline:

from pyspark.ml import Pipeline

pipeline = Pipeline(stages=[assembler, kmeans_estimator])
model = pipeline.fit(df)

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