我希望使用Docker for Windows在我们公司的网络上托管Shiny应用程序。
我该如何设置Docker、odbc.ini、odbcinst.ini、freetds.conf或其他文件,以便我的Shiny应用程序可以从内部Microsoft SQL Server(2016)数据库查询数据?数据库服务器未在运行Docker容器的同一台机器上。
我不知道是否需要更新FreeTDS版本,或者我是否已经错误配置了其中一个文件。我尝试在所有文件中使用服务器的IP地址而不是sql-server.host.com
,但是仍然收到下面相同的错误消息。
$ tsql -C
输出:
Compile-time settings (established with the "configure" script)
Version: freetds v1.00.104
freetds.conf directory: /etc/freetds
MS db-lib source compatibility: no
Sybase binary compatibility: yes
Thread safety: yes
iconv library: yes
TDS version: 4.2
iODBC: no
unixodbc: yes
SSPI "trusted" logins: no
Kerberos: yes
OpenSSL: no
GnuTLS: yes
MARS: no
$ odbcinst -j
输出:
unixODBC 2.3.6
DRIVERS............: /etc/odbcinst.ini
SYSTEM DATA SOURCES: /etc/odbc.ini
FILE DATA SOURCES..: /etc/ODBCDataSources
USER DATA SOURCES..: /root/.odbc.ini
SQLULEN Size.......: 8
SQLLEN Size........: 8
SQLSETPOSIROW Size.: 8
$ cat etc/odbcinst.ini
输出:
[FreeTDS]
Description = FreeTDS unixODBC Driver
Driver = /usr/lib/x86_64-linux-gnu/odbc/libtdsodbc.so
$ cat etc/odbc.ini
输出:
[sql-server]
driver = FreeTDS
server = sql-server.host.com
port = 1433
TDS_Version = 4.2
$ cat etc/freetds/freetds.conf
输出:
[sql-server]
host = sql-server.host.com
port = 1433
tds version = 4.2
R命令出现错误:
con <- dbConnect(odbc::odbc(),
driver = "FreeTDS",
server = "sql-server.host.com",
port = 1433,
database = "database name",
TDS_Version = 4.2)
错误:
Error: nanodbc/nanodbc.cpp:950: 08001: [FreeTDS][SQL Server]Unable to connect to data source
Execution halted
Docker文件:
# Install R version 3.5.3
FROM r-base:3.5.3
# Install Ubuntu packages
RUN apt-get update && apt-get install -y \
sudo \
gdebi-core \
pandoc \
pandoc-citeproc \
libcurl4-gnutls-dev \
libcairo2-dev/unstable \
libxt-dev \
libssl-dev \
unixodbc unixodbc-dev \
freetds-bin freetds-dev tdsodbc
# Edit odbc.ini, odbcinst.ini, and freetds.conf files
RUN echo "[sql-server]\n\
host = sql-server.host.com\n\
port = 1433\n\
tds version = 4.2" >> /etc/freetds.conf
RUN echo "[FreeTDS]\n\
Description = FreeTDS unixODBC Driver\n\
Driver = /usr/lib/x86_64-linux-gnu/odbc/libtdsodbc.so" >> /etc/odbcinst.ini
RUN echo "[sql-server]\n\
driver = FreeTDS\n\
server = sql-server.host.com\n\
port = 1433\n\
TDS_Version = 4.2" >> /etc/odbc.ini
# Install R packages that are required
RUN R -e "install.packages(c('shiny', 'DBI', 'odbc'), repos='http://cran.rstudio.com/')"
# copy the app to the image
RUN mkdir /root/shiny_example
COPY app /root/shiny_example
COPY Rprofile.site /usr/lib/R/etc/
# Make the ShinyApp available at port 801
EXPOSE 801
CMD ["R", "-e", "shiny::runApp('/root/shiny_example')"]
Docker构建和运行命令:
docker build . -t shiny_example
docker run -it --network=host -p 801:801 shiny_example
请注意,以下R代码在我的Windows机器上运行Docker容器,并且我可以成功地查询数据库:
library(DBI)
con <- dbConnect(odbc::odbc(),
driver = "SQL server",
server = "sql-server.host.com")
$ isql -v sql-server
输出:
[S1000][unixODBC][FreeTDS][SQL Server]Unable to connect to data source
[01000][unixODBC][FreeTDS][SQL Server]Unknown host machine name.
[ISQL]ERROR: Could not SQLConnect
$ tsql -S sql-server
输出:
locale is "en_US.UTF-8"
locale charset is "UTF-8"
using default charset "UTF-8"
Error 20013 (severity 2):
Unknown host machine name.
There was a problem connecting to the server
odbc.ini
或freetds.conf
中。 - Renat